Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002356.1 Hibiscus syriacus cultivar Beakdansim tig00004810_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  318585

Tables:   1   2   

This is table  2  of  2  ( 148 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241492--241577
23
3.6
23
78
9
84
37
1
3
58
1.23
241493--241563
23
3.1
24
84
9
87
35
1
4
59
1.26
244036--244215
3
60.7
3
86
1
247
35
1
0
62
1.09
245598--245642
22
2.0
23
79
12
58
35
2
2
60
1.22
246311--246362
17
3.0
17
81
10
61
25
0
1
73
0.94
256964--257037
33
2.2
33
90
4
114
83
0
16
0
0.64
256962--257035
27
2.7
27
87
4
103
82
0
17
0
0.67
258013--258371
52
6.9
53
93
3
613
24
15
22
38
1.92
258015--258371
104
3.4
104
98
0
678
24
15
22
38
1.92
259001--259910
115
7.8
114
90
6
1316
36
13
19
29
1.91
258998--259910
233
3.9
234
93
3
1528
36
13
19
29
1.91
260160--260336
3
59.7
3
86
2
250
34
1
0
63
1.09
261725--261767
22
2.0
21
86
4
59
37
2
2
58
1.24
262793--262817
6
4.2
6
100
0
50
16
0
52
32
1.44
266297--266325
2
14.5
2
100
0
58
51
0
0
48
1.00
274707--274753
2
23.5
2
100
0
94
48
0
0
51
1.00
287488--287534
3
16.3
3
83
16
64
31
2
0
65
1.04
287488--287541
20
2.7
20
88
8
83
31
3
0
64
1.11
287488--287548
32
2.0
29
87
9
86
32
4
0
62
1.17
290566--290639
29
2.6
29
97
2
141
18
21
16
43
1.88
291028--291086
27
2.2
26
85
8
75
25
10
25
38
1.87
297584--297655
29
2.5
29
93
2
128
18
20
18
43
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
298032--298091
27
2.2
27
85
5
77
23
11
26
38
1.89
298055--298176
64
1.9
63
83
8
158
27
18
19
34
1.95
299351--299395
22
2.1
21
88
12
65
33
4
0
62
1.15
312453--312477
13
1.9
13
100
0
50
56
0
0
44
0.99
313176--313234
19
3.2
19
71
9
59
6
15
30
47
1.71
315206--315330
31
4.0
31
91
0
196
37
22
19
20
1.94

Tables:   1   2

The End!