Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002368.1 Hibiscus syriacus cultivar Beakdansim tig00004840_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77465

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4367--4801
135
3.3
130
79
7
439
29
15
22
32
1.95
6025--6073
22
2.2
22
85
7
64
8
10
0
81
0.87
6044--6111
18
3.6
18
76
18
66
5
17
0
76
0.98
6037--6079
11
3.9
11
88
11
61
4
11
0
83
0.78
6026--6082
11
5.0
11
77
14
53
7
10
0
82
0.84
14623--14648
2
13.0
2
100
0
52
50
0
0
50
1.00
25827--25859
17
1.9
17
93
0
57
33
0
12
54
1.37
25958--26147
94
2.0
97
88
4
287
23
17
12
46
1.81
29704--29751
22
2.2
22
96
0
87
37
31
0
31
1.58
30269--30316
22
2.2
22
96
0
87
37
31
0
31
1.58
33348--33423
36
2.1
36
97
0
143
43
14
10
31
1.79
37903--37932
15
2.0
15
100
0
60
13
46
26
13
1.80
38357--38432
36
2.1
36
97
0
143
43
14
10
31
1.79
45488--45520
11
2.8
12
86
9
50
54
0
0
45
0.99
47111--47185
3
25.0
3
79
15
75
62
0
0
37
0.95
47113--47189
20
3.5
21
71
18
68
61
0
0
38
0.96
47111--47185
21
3.2
24
81
14
95
62
0
0
37
0.95
47534--48845
113
11.7
113
91
2
1988
29
17
14
38
1.90
49569--50020
114
4.0
113
92
1
688
31
19
15
33
1.93
59964--60013
21
2.4
21
87
9
68
66
2
2
30
1.14
60619--60651
11
2.8
12
86
9
50
54
0
0
45
0.99
62246--62300
3
18.7
3
85
10
78
65
0
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66339--66381
18
2.4
18
88
7
61
34
18
16
30
1.93
68290--68322
14
2.2
16
89
10
52
27
27
3
42
1.70
70694--70762
8
8.5
8
70
9
50
18
5
0
75
1.00
70694--70742
15
3.2
15
85
2
71
20
2
0
77
0.87
70882--70908
6
4.5
6
100
0
54
44
0
0
55
0.99
74656--74908
95
2.7
95
87
3
316
33
15
17
33
1.92
76041--77465
84
17.0
84
78
3
1334
32
25
18
23
1.97
76041--77465
252
5.7
252
81
2
1536
32
25
18
23
1.97

Tables:   1

The End!