Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002579.1 Hibiscus syriacus cultivar Beakdansim tig00005224_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111001

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13907--14057
76
2.0
76
97
0
284
37
23
7
31
1.84
14036--14081
20
2.3
20
96
0
83
36
34
6
21
1.80
14061--14114
26
2.1
26
96
0
99
33
25
5
35
1.80
14735--14773
17
2.3
17
86
0
51
51
5
5
38
1.46
14894--14934
12
3.4
12
93
0
64
56
0
0
43
0.99
28900--38089
766
12.0
766
96
0
16750
25
20
20
33
1.97
39936--39994
31
1.9
30
86
10
84
47
8
10
33
1.68
56842--56875
17
2.1
16
88
5
50
76
0
8
14
1.01
60704--60747
20
2.2
20
84
4
63
65
0
15
18
1.27
67096--67129
17
2.1
16
88
5
50
76
0
8
14
1.01
68873--68932
20
2.8
20
82
9
66
23
31
26
18
1.97
80612--80773
65
2.5
65
86
1
218
31
24
16
28
1.96
87744--88438
344
2.0
345
98
0
1338
37
22
14
25
1.92
91874--91968
44
2.2
44
83
11
115
26
22
20
31
1.98
91893--91973
23
3.6
22
75
14
76
23
23
23
29
1.99
93531--93560
15
2.0
15
100
0
60
33
0
26
40
1.57
93944--94094
65
2.3
64
87
1
212
31
21
16
30
1.96
95506--95533
14
2.0
14
100
0
56
28
14
21
35
1.92
98154--98191
19
2.1
19
85
5
51
23
23
7
44
1.79
100544--100575
2
16.0
2
100
0
64
50
0
0
50
1.00
101749--101778
16
1.9
15
93
6
51
50
0
0
50
1.00
104299--104334
18
2.0
18
89
10
56
30
8
0
61
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105367--105455
16
5.1
16
72
23
56
55
2
0
42
1.12
105401--105431
12
2.5
13
89
10
55
51
0
0
48
1.00
105417--105464
25
1.9
25
95
0
87
45
4
2
47
1.33
106089--106170
43
2.0
41
82
4
101
36
4
10
47
1.60
106902--106969
32
2.1
33
86
8
95
32
7
27
32
1.84
109939--109983
24
1.9
24
86
4
65
24
0
2
73
0.95

Tables:   1

The End!