Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000270.1 Hibiscus syriacus cultivar Beakdansim tig00000497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53105

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5478--6013
20
23.6
20
73
20
190
22
22
11
44
1.85
5468--5808
46
7.5
46
93
1
553
21
22
12
43
1.85
5585--5884
73
4.2
72
78
15
309
20
22
12
45
1.84
5611--6115
165
3.1
158
86
7
645
21
23
11
43
1.85
5795--6127
46
7.6
46
77
14
251
22
22
11
43
1.85
5868--6062
66
3.1
65
84
7
251
22
24
10
43
1.84
5599--6128
211
2.5
208
82
10
492
21
22
11
44
1.85
5998--6027
12
2.5
12
100
0
60
20
23
10
46
1.80
5952--6062
58
1.9
58
90
0
177
22
24
9
43
1.83
6010--6127
44
2.6
46
85
5
177
22
22
12
42
1.87
21029--21088
13
4.6
13
93
0
93
33
16
20
30
1.94
21021--21088
26
2.6
26
85
0
91
35
16
20
27
1.94
29044--29126
21
3.8
22
70
14
55
22
37
22
16
1.94
46404--46450
20
2.3
20
96
0
85
17
29
23
29
1.97
51976--52016
21
2.0
20
85
4
55
36
0
4
58
1.20

Tables:   1

The End!