Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002705.1 Hibiscus syriacus cultivar Beakdansim tig00005582_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  469953

Tables:   1   2   3   

This is table  3  of  3  ( 251 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
467110--467189
33
2.4
33
95
0
142
12
18
21
47
1.81
467129--467189
19
3.5
19
74
21
78
14
19
19
45
1.85
467162--467248
20
4.4
20
82
1
104
16
24
24
35
1.94
467236--467274
20
2.0
20
94
0
69
25
12
28
33
1.93
467183--467259
40
1.9
40
83
2
100
19
22
24
33
1.97
467620--467689
21
3.3
20
72
7
59
24
41
15
18
1.89
467618--467701
42
2.0
42
88
0
123
22
42
15
19
1.88
469279--469328
18
2.8
18
90
0
82
46
20
22
12
1.83
469367--469454
20
4.4
20
77
5
106
14
22
23
38
1.92
469350--469454
40
2.6
41
77
4
115
15
22
22
39
1.92
469664--469755
20
4.6
20
71
2
67
20
17
21
40
1.92

Tables:   1   2   3

The End!