Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002853.1 Hibiscus syriacus cultivar Beakdansim tig00005872_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89506

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--347
11
3.1
11
91
8
50
21
18
25
34
1.96
410--525
29
4.0
28
82
7
117
33
5
23
37
1.77
410--552
30
5.0
29
82
8
150
32
4
21
40
1.75
7548--7598
12
4.4
12
85
7
70
17
47
19
15
1.83
7600--7763
29
5.7
28
83
7
202
31
5
24
39
1.78
9587--9626
18
2.3
19
83
16
59
70
2
2
25
1.13
14967--15058
29
3.3
27
73
8
85
20
15
14
50
1.78
16808--37763
659
31.9
659
90
1
32340
36
16
15
31
1.90
37776--46125
658
12.7
659
89
1
12592
35
16
15
32
1.91
46122--50938
659
7.3
659
90
1
7397
36
16
15
31
1.90
52728--57267
659
6.9
658
91
1
7336
37
15
14
32
1.89
57265--78468
659
32.3
659
90
1
31825
36
16
15
31
1.90
79610--81334
565
3.0
563
87
6
2574
36
16
16
30
1.91
80179--82027
597
3.0
596
85
7
2294
36
16
15
31
1.91
80767--84642
659
5.9
659
90
1
5913
36
16
15
31
1.90

Tables:   1

The End!