Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002863.1 Hibiscus syriacus cultivar Beakdansim tig00005903_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64358

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11110--11259
53
2.8
53
94
0
255
25
18
18
38
1.93
17343--17552
65
3.2
64
79
12
232
25
19
24
30
1.98
19708--19735
2
14.0
2
100
0
56
50
0
0
50
1.00
25959--26007
19
2.7
17
87
9
62
28
20
26
24
1.99
25979--26138
65
2.5
65
85
5
200
26
19
23
30
1.98
25961--26188
64
3.5
63
76
13
205
27
19
22
30
1.98
27210--27252
18
2.4
18
100
0
86
25
11
32
30
1.91
27386--27543
53
3.0
53
91
0
253
27
17
17
37
1.92
31909--33530
6
271.5
6
96
2
3009
16
0
33
49
1.50
33549--33656
2
55.0
2
66
20
50
47
5
2
44
1.41
33549--33597
16
3.3
15
83
11
57
44
4
4
46
1.41
47755--47810
19
2.9
19
83
0
76
8
28
37
25
1.86
47822--47909
13
6.7
13
66
21
58
6
31
37
23
1.81
47825--47898
31
2.4
31
82
6
80
8
31
36
24
1.84
47822--47914
22
4.2
22
86
2
116
7
32
36
23
1.83
52999--53023
13
1.9
13
100
0
50
0
32
48
20
1.50
52999--53049
22
2.3
22
86
0
66
7
31
37
23
1.83

Tables:   1

The End!