Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002879.1 Hibiscus syriacus cultivar Beakdansim tig00005936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  492147

Tables:   1   2   3   

This is table  3  of  3  ( 252 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
459818--460377
112
4.9
113
82
8
643
38
15
18
27
1.91
460715--460756
3
14.0
3
94
0
75
33
2
0
64
1.07
462216--462247
2
16.0
2
100
0
64
50
0
0
50
1.00
466707--466778
15
5.0
15
70
16
62
54
2
1
41
1.23
466706--466793
42
2.1
41
97
2
167
52
4
2
40
1.34
469218--469337
35
3.3
36
89
5
181
43
20
5
31
1.73
469269--469329
21
3.2
21
65
29
64
42
21
4
31
1.74
469220--469364
35
4.1
36
83
11
142
41
19
6
33
1.76
473395--473428
16
2.1
16
94
0
59
32
26
8
32
1.87
473834--473918
37
2.3
37
86
6
120
42
20
4
32
1.72
484365--484414
22
2.2
23
89
3
75
40
16
24
20
1.91
484879--485049
47
3.8
46
84
6
224
33
21
7
38
1.81

Tables:   1   2   3

The End!