Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002897.1 Hibiscus syriacus cultivar Beakdansim tig00005986_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  131174

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88855--88890
19
1.9
19
94
5
65
72
5
0
22
1.05
90211--90269
20
3.1
19
76
7
57
33
0
1
64
1.04
90268--90378
3
36.7
3
88
1
168
63
0
3
33
1.12
90698--92274
113
14.0
113
92
1
2443
29
18
14
36
1.91
90698--92274
566
2.8
566
94
1
2699
29
18
14
36
1.91
92679--92752
22
3.4
22
88
0
103
39
13
12
35
1.82
95213--95641
83
5.2
83
92
2
691
35
21
14
27
1.93
97862--97886
11
2.3
11
100
0
50
0
16
0
84
0.63
103415--103450
19
1.9
19
94
5
65
72
8
0
19
1.10
104748--104809
20
3.2
19
77
6
61
33
0
1
64
1.03
104760--104815
29
2.0
30
83
13
75
37
0
1
60
1.07
104808--104900
3
30.7
3
86
2
132
62
0
4
33
1.15
106299--106339
17
2.3
18
87
8
57
60
0
0
39
0.96
107754--107790
17
2.2
17
95
0
65
24
5
45
24
1.74
107754--107796
17
2.5
17
88
0
50
23
6
46
23
1.76
109021--109081
30
2.0
30
93
0
104
27
31
11
29
1.92
115176--115228
26
2.0
26
81
0
61
39
18
20
20
1.92
116402--116426
2
12.5
2
100
0
50
48
0
0
52
1.00
121718--121809
45
2.0
45
95
0
166
44
22
1
31
1.60
122899--122939
21
1.9
22
85
14
59
24
4
17
53
1.63
125502--125615
36
3.2
36
70
5
95
31
19
11
37
1.87
128173--128222
20
2.5
20
93
0
82
30
30
24
16
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128210--128253
20
2.2
20
84
8
54
31
31
18
18
1.95
129986--130106
35
3.4
35
77
8
136
26
17
16
39
1.90
129966--130106
72
2.0
72
92
0
237
26
17
17
38
1.92
129963--130080
36
3.3
36
77
9
150
27
16
17
38
1.92

Tables:   1   2

The End!