Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002900.1 Hibiscus syriacus cultivar Beakdansim tig00005991_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  258366

Tables:   1   2   

This is table  2  of  2  ( 152 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
208836--208888
19
2.7
19
83
11
72
13
3
0
83
0.79
208839--208895
10
6.0
10
74
13
50
12
5
0
82
0.82
208827--208903
35
2.2
34
84
13
95
14
5
1
79
0.97
208934--208983
3
17.0
3
95
4
93
34
0
0
66
0.92
211581--211778
96
2.1
97
87
5
294
34
15
17
32
1.92
212834--212997
74
2.2
75
89
4
251
21
19
26
31
1.97
219661--220454
84
9.5
84
91
0
1237
33
23
19
22
1.97
224221--224259
17
2.3
18
86
13
64
17
0
7
74
1.05
225821--226123
148
2.1
147
91
0
480
35
16
17
31
1.92
228793--228869
19
4.1
18
73
8
64
75
2
3
18
1.07
229016--229060
21
2.2
19
84
15
54
82
2
2
13
0.86
230231--230324
4
24.5
4
74
20
69
71
2
3
23
1.12
230250--230326
34
2.2
34
86
2
100
70
2
2
24
1.13
230231--230320
7
12.9
7
70
18
55
71
2
3
23
1.13
230232--230297
14
4.4
14
80
12
78
72
1
1
24
1.01
230368--230616
37
6.6
38
85
9
316
43
6
5
44
1.53
230368--230613
110
2.2
113
87
7
331
43
6
5
44
1.53
231225--232394
84
14.1
82
78
6
1029
25
19
24
31
1.98
231227--232346
249
4.5
249
85
2
1368
25
19
24
30
1.98
231227--232350
165
6.8
162
81
5
1078
25
19
24
30
1.98
233525--233748
95
2.5
87
79
15
269
32
19
18
29
1.96
233573--233768
95
2.1
94
88
3
295
32
18
16
32
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
237344--237413
15
4.7
15
75
8
63
78
2
4
14
1.02
238866--239202
39
8.8
38
85
8
411
44
6
4
44
1.51
239019--239043
13
1.9
13
100
0
50
40
8
0
52
1.31
247530--247604
3
26.0
3
74
12
68
57
0
0
42
0.98
247527--247596
12
6.1
12
80
12
76
52
0
0
47
1.00
247957--248305
73
4.8
73
95
1
610
39
13
17
28
1.88
247957--248305
145
2.4
146
94
0
610
39
13
17
28
1.88
250395--250569
76
2.3
76
86
1
226
30
21
16
31
1.95
251507--251569
31
2.0
31
96
0
117
33
12
19
34
1.89
258255--258311
29
2.0
29
82
6
71
49
0
1
49
1.11

Tables:   1   2

The End!