Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002923.1 Hibiscus syriacus cultivar Beakdansim tig00006041_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  190927

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182145--182225
19
4.3
18
87
3
90
14
17
20
46
1.83
182155--182233
38
2.1
38
83
4
97
13
17
18
49
1.80
182332--182368
14
2.6
14
91
0
65
45
21
0
32
1.52
184215--184332
19
6.6
19
67
20
76
46
20
22
11
1.81
184257--184311
14
3.6
14
73
21
56
45
21
23
9
1.80
184239--184332
33
2.8
33
96
0
170
45
21
23
9
1.81
184362--184407
14
3.3
14
84
0
65
6
21
23
47
1.74
184395--184462
21
3.4
20
76
6
66
14
17
23
44
1.86
184513--184787
95
3.1
91
86
7
370
46
18
12
22
1.82
184631--184787
82
1.9
82
93
0
269
44
17
13
24
1.85
186540--186596
14
3.7
14
72
20
51
10
22
22
43
1.84
186524--186603
33
2.4
33
91
0
124
10
18
22
48
1.77
186588--186659
20
3.5
20
83
5
83
13
16
19
50
1.79
187356--187441
20
4.2
20
83
2
118
37
18
22
22
1.94
187994--188083
20
4.8
20
72
18
77
50
21
17
11
1.77
187994--188094
20
5.5
19
71
16
70
49
22
16
10
1.77
188112--188148
14
2.6
14
100
0
74
8
27
24
40
1.83
188134--188197
20
3.1
21
80
8
69
12
25
17
45
1.83
189934--189962
12
2.3
13
94
5
51
3
6
17
72
1.21
189877--190155
92
3.1
91
90
5
431
21
11
19
48
1.80
190295--190375
19
4.7
19
70
17
70
12
20
20
45
1.83

Tables:   1   2

The End!