Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002957.1 Hibiscus syriacus cultivar Beakdansim tig00006113_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68104

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3434--3627
97
2.0
96
98
1
379
22
16
12
48
1.79
11437--11486
24
2.1
24
85
7
66
26
2
12
60
1.43
13083--13126
20
2.2
20
84
4
63
65
0
15
18
1.27
19961--20010
24
2.1
24
85
7
66
60
12
2
26
1.43
22987--23105
31
3.9
29
69
19
73
47
0
4
48
1.21
23170--23284
8
14.1
8
68
21
53
46
1
0
51
1.17
23241--23287
22
2.1
23
88
4
69
53
0
0
46
1.00
23214--23294
30
2.5
35
80
13
100
50
0
1
48
1.08
23248--23305
22
2.6
22
81
7
64
53
0
0
46
1.00
23519--23608
41
2.2
41
90
6
137
47
20
14
17
1.82
30096--30130
18
1.9
18
88
0
52
54
0
17
28
1.43
33563--33617
8
7.0
8
73
10
51
49
0
0
50
1.00
33574--33620
22
2.1
23
88
4
69
53
0
0
46
1.00
33563--33626
30
2.1
32
91
5
105
51
0
0
48
1.00
33581--33637
21
2.6
22
81
10
64
52
0
0
47
1.00
33851--33940
41
2.2
41
90
6
137
47
20
14
17
1.82
40427--40461
18
1.9
18
88
0
52
54
0
17
28
1.43
45415--45462
2
24.0
2
100
0
96
50
0
0
50
1.00
48964--50465
106
14.4
106
92
2
2333
22
18
26
32
1.97
48964--50465
521
2.9
521
93
2
2514
22
18
26
32
1.97
48964--50465
626
2.4
626
94
1
2567
22
18
26
32
1.97
52215--52271
26
2.2
25
79
11
62
57
8
17
15
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65996--66616
51
11.6
55
91
3
620
28
25
16
29
1.97
67933--67988
24
2.5
22
78
13
62
5
19
0
75
1.00

Tables:   1

The End!