Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000296.1 Hibiscus syriacus cultivar Beakdansim tig00000545_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  216456

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191685--192204
108
4.9
108
84
7
692
37
21
23
18
1.94
192081--192204
36
3.4
36
90
4
205
36
21
24
17
1.95
191986--192170
94
2.0
94
89
2
282
38
19
24
16
1.92
191951--192201
130
1.9
130
89
3
389
37
20
24
17
1.93
196450--196484
18
2.0
18
94
5
63
2
11
22
62
1.41
201082--201136
28
2.0
28
96
0
101
30
3
12
52
1.56
201760--201786
10
2.7
10
100
0
54
11
40
18
29
1.85
202130--202231
32
3.2
32
78
1
96
19
9
24
46
1.80
202259--202343
32
2.6
33
87
5
120
7
15
32
44
1.73
202236--202341
16
6.6
16
81
4
97
7
16
31
45
1.75
202259--202357
32
3.1
32
84
5
119
7
14
31
47
1.70
202316--202391
38
2.0
39
84
7
102
9
11
28
50
1.70
203698--203760
32
2.0
32
96
0
117
33
12
19
34
1.89
204673--205143
54
8.8
54
89
1
653
38
17
11
33
1.85
204648--205143
160
3.1
160
88
1
715
37
17
11
32
1.87
204673--205143
214
2.2
215
88
1
705
38
17
11
33
1.85
205552--205658
26
4.2
26
94
3
184
32
21
12
33
1.90
205652--205690
15
2.5
15
87
4
51
38
23
12
25
1.90
208158--208206
24
2.0
25
84
8
64
42
6
6
44
1.54

Tables:   1   2

The End!