Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002999.1 Hibiscus syriacus cultivar Beakdansim tig00006203_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58775

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
355--621
80
3.3
82
78
9
298
24
18
23
33
1.97
374--611
84
3.0
80
80
6
277
23
18
23
33
1.97
777--980
111
1.8
111
92
1
347
25
17
26
29
1.98
937--1376
237
1.8
239
87
4
663
25
18
22
32
1.97
2623--2805
95
2.0
94
83
7
239
32
16
16
33
1.92
3736--3783
19
2.7
18
90
9
64
43
12
8
35
1.73
3744--3783
19
2.1
19
100
0
80
45
15
10
30
1.78
6932--6956
3
8.3
3
100
0
50
68
0
0
32
0.90
7963--8098
60
2.3
60
81
2
157
31
25
4
38
1.75
13683--13740
22
2.5
24
78
13
68
72
0
6
20
1.07
14188--14222
12
2.9
12
88
12
54
17
57
25
0
1.40
15095--15297
38
5.6
37
76
15
185
44
7
3
44
1.50
15165--15296
65
2.0
66
89
4
205
44
6
4
43
1.51
15209--15269
25
2.3
27
86
10
83
47
6
3
42
1.45
15951--16536
84
7.0
84
81
3
682
24
19
25
30
1.98
15951--16536
168
3.5
168
84
3
770
24
19
25
30
1.98
15911--16536
332
1.9
335
86
3
902
23
20
25
30
1.98
21277--21302
6
4.3
6
100
0
52
50
0
0
50
1.00
23216--23452
37
6.4
37
75
16
195
43
8
4
43
1.54
23216--23424
75
2.8
74
85
10
266
44
8
3
43
1.53
23455--23485
2
15.5
2
93
0
53
48
0
3
48
1.17
24934--24984
3
17.0
3
92
8
86
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24934--24981
20
2.5
20
96
3
89
33
0
0
66
0.92
29121--29164
7
6.0
7
82
10
52
38
0
0
61
0.96
29111--29158
16
2.9
16
87
3
60
37
0
0
62
0.95
29111--29175
23
2.8
23
93
4
105
35
1
0
63
1.04
29119--29164
16
3.1
15
81
9
58
39
0
0
60
0.97
31559--31632
23
3.2
23
80
5
87
60
21
9
8
1.53
31885--31945
20
3.0
20
80
4
68
63
16
3
16
1.43
37492--37730
121
2.0
117
86
8
304
23
15
16
44
1.86
50081--50159
21
3.7
22
75
11
76
22
35
25
16
1.95
54851--54876
2
13.0
2
100
0
52
50
0
0
50
1.00
55706--55861
50
3.1
50
85
0
197
16
32
32
17
1.93
58576--58666
22
4.1
22
94
0
155
28
29
26
15
1.96

Tables:   1

The End!