Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003081.1 Hibiscus syriacus cultivar Beakdansim tig00006428_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64975

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2258--2282
10
2.5
10
100
0
50
32
28
0
40
1.57
5511--5545
15
2.5
13
90
9
52
71
0
22
5
1.07
21447--21499
22
2.4
21
75
9
52
30
7
22
39
1.82
27024--27063
6
6.7
6
88
0
53
2
12
45
40
1.56
27358--27399
22
1.9
22
85
0
57
30
9
21
38
1.85
29992--33783
952
4.0
952
98
0
7296
30
14
15
38
1.88
42399--43207
204
4.0
204
91
1
1275
38
21
20
20
1.94
43321--43639
78
4.1
78
82
3
347
32
16
28
22
1.96
44393--44428
3
12.0
3
100
0
72
66
0
33
0
0.92
44276--44553
144
1.9
144
96
0
511
40
15
29
15
1.87
47002--47373
42
8.7
42
77
5
354
31
17
25
26
1.97
47002--47373
85
4.4
85
83
2
392
31
17
25
26
1.97
47040--47363
170
1.9
170
84
3
438
30
15
25
27
1.96
51001--51168
40
4.2
41
76
11
143
32
17
20
29
1.95
51535--51602
2
35.0
2
88
5
104
48
0
2
48
1.16
51590--51672
23
3.6
22
85
8
112
50
2
8
38
1.46
51588--51714
22
5.0
26
70
22
74
48
2
8
40
1.47
51584--51718
23
5.1
28
75
15
78
48
2
8
40
1.48
51716--51753
17
2.2
17
90
4
58
42
0
7
50
1.31
51697--51753
18
3.3
18
76
16
59
40
1
7
50
1.40
53608--53646
11
3.5
11
89
0
60
33
5
0
61
1.18

Tables:   1

The End!