Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003110.1 Hibiscus syriacus cultivar Beakdansim tig00006499_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101929

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2668--2875
75
2.8
75
87
4
278
29
0
12
56
1.43
10203--10279
36
2.1
38
83
9
97
44
22
9
24
1.81
11187--11314
44
3.2
43
64
28
109
25
1
12
60
1.41
11289--11326
19
2.0
19
89
0
58
31
0
15
52
1.43
11192--11400
76
2.8
77
87
3
291
28
0
12
57
1.41
18077--18158
29
2.8
29
96
1
146
31
14
13
40
1.85
22814--22895
29
2.8
29
94
1
137
32
14
12
40
1.83
28019--28044
2
13.0
2
100
0
52
50
0
0
50
1.00
30275--30354
22
3.6
22
70
12
65
40
20
16
23
1.91
30617--30665
21
2.3
21
85
0
80
32
12
18
36
1.88
33781--33821
17
2.4
17
87
0
55
14
12
9
63
1.52
34657--34690
12
2.8
12
86
0
50
85
0
2
11
0.71
45112--45170
24
2.4
25
97
2
111
47
3
0
49
1.18
51876--51919
20
2.2
20
85
14
65
27
6
9
56
1.55
52293--52318
3
8.7
3
100
0
52
69
0
0
30
0.89
56073--56169
44
2.1
48
88
7
148
27
11
20
40
1.87
65823--65958
7
18.0
7
72
15
76
75
1
16
6
1.08
65835--65967
46
2.9
46
78
12
139
75
0
15
7
1.06
65823--65958
40
3.4
38
75
19
116
75
1
16
6
1.08
65850--65956
24
4.6
22
71
23
85
77
0
14
7
0.97
65850--65962
16
7.2
16
80
17
105
76
0
15
7
0.98
67094--67504
51
8.0
51
95
1
669
28
16
27
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67109--67551
51
8.5
55
92
3
240
28
16
26
28
1.97
78101--78260
60
2.7
60
83
6
175
45
2
21
31
1.65
79089--79222
29
4.5
29
76
7
124
23
34
25
16
1.95
79119--79235
62
1.9
61
87
1
171
21
34
27
17
1.95
80411--80498
42
2.1
42
95
0
158
26
39
19
14
1.90
80664--80692
10
2.9
10
100
0
58
10
31
31
27
1.90
89865--89908
22
1.9
24
81
9
56
61
13
9
15
1.56
90148--90181
17
2.0
17
88
11
52
50
0
0
50
1.00
90587--90614
4
7.0
4
100
0
56
75
0
0
25
0.81
91158--91190
9
3.8
9
84
8
50
54
0
0
45
0.99
91343--91502
62
2.6
62
90
0
257
29
8
9
53
1.62
92721--92755
17
2.1
17
88
0
52
20
25
31
22
1.98
92845--92888
3
15.0
3
88
4
63
61
0
2
36
1.09
93062--93166
42
2.5
42
82
3
113
36
17
17
29
1.92
93057--93984
249
3.7
247
90
2
1369
35
16
16
31
1.91
93822--93903
42
2.0
42
90
0
128
35
21
18
24
1.96
97053--97112
24
2.5
23
82
15
68
1
15
0
83
0.73
97054--97120
8
8.8
8
75
15
52
2
13
0
83
0.76

Tables:   1

The End!