Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003157.1 Hibiscus syriacus cultivar Beakdansim tig00006641_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  217688

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181837--181877
19
2.2
19
90
0
64
34
4
19
41
1.73
182686--182726
20
2.0
20
86
9
57
19
2
17
60
1.46
187015--187068
20
2.6
21
88
2
74
27
25
25
20
1.99
187103--187145
22
1.9
23
90
4
70
20
20
32
25
1.97
187092--187187
21
4.6
20
83
13
122
21
20
35
21
1.96
187267--187324
30
2.0
29
90
10
91
44
17
5
32
1.70
187267--187326
29
2.0
30
93
6
104
43
16
6
33
1.74
189022--189062
22
1.9
21
90
5
64
26
0
2
70
0.99
189141--189182
17
2.5
17
92
0
66
9
33
26
30
1.88
192477--192515
20
2.0
20
94
0
69
17
20
17
43
1.88
199489--199531
15
2.7
16
85
10
61
39
9
11
39
1.74
202839--202903
18
3.4
18
72
12
67
46
16
7
29
1.75
202827--202903
39
2.0
39
97
0
145
46
18
7
27
1.76
204811--204872
31
2.0
31
81
9
74
33
22
8
35
1.84
209503--209579
40
2.0
40
89
2
120
50
15
6
27
1.68
209618--209663
13
3.5
13
84
0
65
21
21
0
56
1.42
209680--209768
19
4.8
18
79
6
70
29
17
6
46
1.74
213516--213611
47
2.0
47
95
0
174
40
14
17
27
1.89

Tables:   1   2

The End!