Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003173.1 Hibiscus syriacus cultivar Beakdansim tig00006676_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41565

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1685--1743
28
2.1
28
93
6
102
18
40
6
33
1.77
11776--11878
45
2.2
47
84
6
138
39
19
13
27
1.89
15108--15541
55
8.0
54
79
6
291
31
22
17
28
1.96
15129--15541
110
3.8
110
78
6
378
31
23
16
28
1.96
15185--15487
165
1.8
165
87
2
457
32
22
16
28
1.96
15384--15547
51
3.1
51
91
3
247
29
25
17
28
1.97
15837--15871
17
2.1
17
89
10
54
31
22
2
42
1.68
16903--17049
8
18.6
8
73
17
96
10
15
0
73
1.09
16918--16990
15
4.9
15
78
17
80
9
15
0
75
1.04
16920--16990
7
9.6
7
83
11
63
8
15
0
76
1.02
20930--21085
64
2.4
64
80
8
183
35
19
17
26
1.95
25599--25701
45
2.2
47
86
6
147
39
20
13
26
1.89
28331--28396
31
2.1
31
88
0
96
21
21
19
37
1.94
29376--29420
23
2.0
23
86
0
63
24
31
24
20
1.98
29399--29702
149
2.0
149
99
0
599
35
20
16
27
1.94
36334--36378
23
2.0
23
86
0
63
24
31
24
20
1.98
36357--36660
149
2.0
149
98
0
581
35
19
16
27
1.93

Tables:   1

The End!