Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003214.1 Hibiscus syriacus cultivar Beakdansim tig00006767_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94353

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6545--6851
152
2.0
154
89
1
465
26
14
17
40
1.89
17539--17618
31
2.7
29
79
9
83
41
6
16
36
1.73
18587--18645
29
2.0
31
90
6
95
30
6
27
35
1.83
22482--22543
9
6.6
9
80
9
61
77
0
12
9
0.99
22482--22565
10
8.5
10
79
12
75
79
1
11
7
0.97
22499--22564
28
2.3
28
78
5
78
80
1
13
4
0.94
22472--22582
11
10.9
10
77
13
66
78
1
12
7
1.03
22511--22582
22
3.4
21
81
11
76
80
2
13
2
0.93
22539--22580
12
3.5
12
87
9
59
85
4
9
0
0.72
25440--25468
14
2.1
14
100
0
58
27
6
37
27
1.82
26404--26446
18
2.3
18
92
4
68
20
13
9
55
1.66
30566--30688
36
3.6
36
69
22
102
26
18
12
42
1.86
30658--30715
28
2.1
27
81
9
64
32
15
15
36
1.89
30574--30772
64
3.1
65
89
2
310
26
19
14
39
1.90
31189--31239
3
17.3
3
91
4
86
37
0
0
62
0.95
36549--36591
20
2.1
21
87
8
63
18
13
0
67
1.23
36548--36597
20
2.5
20
75
15
59
18
18
0
64
1.30
40418--40451
17
2.1
16
88
5
50
14
8
0
76
1.01
42972--43317
92
3.8
92
74
7
317
39
9
14
36
1.79
46945--47327
140
2.7
140
85
3
504
43
15
11
30
1.82
49158--49212
15
3.4
16
80
16
53
69
0
7
23
1.14
51522--51553
16
1.9
17
93
6
57
50
0
3
46
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52930--52969
17
2.4
17
95
0
71
15
15
10
60
1.60
53003--53057
15
3.4
16
80
16
53
69
0
7
23
1.14
61979--62014
16
2.3
16
90
4
56
72
5
13
8
1.27
62922--63579
325
2.0
325
97
0
1255
32
8
14
43
1.76
64602--64658
20
3.0
18
80
14
62
80
5
1
12
0.95
64598--64682
15
6.1
14
75
14
68
81
4
5
8
0.99
64650--64683
12
2.8
12
86
0
50
85
2
11
0
0.71
64635--64681
16
2.9
16
81
6
51
85
6
6
2
0.82
64656--64832
64
2.8
62
76
16
168
70
3
10
15
1.29
67946--68108
82
2.0
82
98
0
317
29
20
19
31
1.97
77604--77676
29
2.5
30
81
2
85
78
5
5
10
1.09
77661--77717
17
3.2
17
79
18
71
78
3
7
10
1.05
77632--77701
30
2.4
30
81
9
83
80
5
4
10
1.02
77626--77717
36
2.6
35
84
8
107
79
4
6
9
1.05
77776--77808
2
16.5
2
100
0
66
51
0
0
48
1.00
77858--77903
14
3.4
13
82
8
56
58
0
2
39
1.10
77847--77891
18
2.4
18
85
10
56
60
0
2
37
1.09
79993--80044
15
3.2
16
70
20
54
42
1
23
32
1.65
79973--80049
32
2.4
32
100
0
154
41
2
23
32
1.68
87493--87522
14
2.1
14
93
0
51
40
16
0
43
1.48
91017--91083
34
1.9
35
90
3
109
31
0
23
44
1.54
91855--91893
17
2.4
16
83
8
51
58
0
2
38
1.12

Tables:   1

The End!