Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003229.1 Hibiscus syriacus cultivar Beakdansim tig00006799_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47810

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10686--11131
41
10.8
42
84
7
540
28
21
18
31
1.97
10686--11131
83
5.4
83
89
1
628
28
21
18
31
1.97
16902--16960
21
2.8
21
84
0
73
18
5
20
55
1.61
17113--17337
43
5.3
43
85
2
258
26
23
21
28
1.99
28001--28033
3
11.0
3
100
0
66
66
0
33
0
0.92
30978--31027
18
2.6
19
80
17
59
24
0
10
66
1.22
34502--34639
62
2.2
62
97
0
258
26
18
34
21
1.96
37820--37925
21
5.1
21
77
10
110
48
10
3
37
1.56
37820--38053
42
5.4
42
75
8
191
49
7
3
40
1.47
37932--38066
21
6.4
21
81
2
146
51
3
1
42
1.28
37933--38066
11
12.7
11
76
15
122
52
2
1
43
1.25
38421--38472
20
2.7
21
82
14
67
69
0
3
26
1.06
38407--38483
22
3.4
23
73
18
72
68
0
6
24
1.13
40130--40290
29
5.6
29
80
5
139
45
17
3
33
1.66
40218--40291
27
2.7
27
83
10
87
43
18
4
33
1.69
40128--40291
56
2.9
56
79
5
168
45
17
3
33
1.65
41069--41137
21
3.3
21
89
0
102
44
10
4
40
1.58
42095--42573
13
36.8
13
90
9
693
0
30
54
15
1.41
42095--42573
7
72.4
7
92
7
762
0
30
54
15
1.41
42095--42573
20
24.1
21
91
8
762
0
30
54
15
1.41
42571--47810
7
761.3
7
94
4
9303
14
0
43
42
1.46

Tables:   1

The End!