Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003285.1 Hibiscus syriacus cultivar Beakdansim tig00006913_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46132

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7347--7395
23
2.2
22
85
10
64
22
8
0
69
1.14
10913--10947
18
1.9
18
94
0
61
85
0
2
11
0.69
10905--10958
7
7.6
7
82
14
58
83
0
3
12
0.78
11831--12459
124
5.1
124
88
2
844
39
16
18
25
1.91
15558--15741
75
2.5
75
82
0
206
27
7
16
48
1.71
17152--17189
14
2.7
14
87
0
58
10
10
18
60
1.57
17159--17209
24
2.1
24
88
0
75
9
7
19
62
1.50
17385--17486
23
4.3
24
80
8
111
10
11
18
58
1.61
24754--24975
115
1.9
116
92
3
374
38
14
9
37
1.78
24981--25039
2
29.5
2
100
0
118
50
0
0
49
1.00
25056--25096
3
13.3
3
84
5
55
60
0
0
39
0.96
26666--26698
17
1.9
17
93
0
57
72
0
6
21
1.05
28295--28391
2
49.5
2
82
8
119
45
4
1
49
1.28
28389--33639
4
1324.2
4
96
2
9611
25
0
24
49
1.55
33705--33739
2
18.0
2
88
5
54
45
0
2
51
1.16
34083--34150
29
2.3
29
89
0
100
35
27
2
33
1.72
34565--34636
36
2.0
36
83
8
92
48
1
4
45
1.30
35064--35108
13
3.4
13
80
17
56
46
0
8
44
1.34
35205--35241
19
1.9
19
100
0
74
45
27
0
27
1.54
37085--37177
33
2.8
33
85
1
116
29
16
19
35
1.93
38725--38781
29
2.0
29
82
6
71
45
10
1
42
1.49

Tables:   1

The End!