Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003288.1 Hibiscus syriacus cultivar Beakdansim tig00006918_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  186948

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162627--162675
23
2.2
22
82
10
55
75
0
6
18
1.00
162544--162648
52
2.0
52
83
7
133
64
1
6
26
1.28
162664--162728
5
12.2
5
73
15
51
76
3
6
13
1.09
162666--162728
16
3.9
16
74
13
67
77
3
6
12
1.07
163854--164525
200
3.4
200
86
1
945
27
20
18
33
1.96
171079--171198
60
2.0
59
81
10
138
66
1
6
25
1.25
171365--171407
18
2.4
18
92
0
68
72
0
6
20
1.08
173002--173154
75
2.0
77
92
2
256
46
13
9
30
1.75
175250--175388
6
24.3
6
91
5
211
82
0
0
17
0.68
175265--175388
1
124.0
1
67
0
59
83
0
0
16
0.66
176732--176785
21
2.6
21
90
0
90
37
18
11
33
1.86
176732--176792
21
2.9
21
81
18
74
32
21
9
36
1.86
185783--185809
12
2.2
12
100
0
54
18
14
37
29
1.91

Tables:   1   2

The End!