Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003457.1 Hibiscus syriacus cultivar Beakdansim tig00007306_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50354

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7739--7839
52
1.9
53
87
2
150
48
13
23
13
1.79
8581--9038
105
4.4
105
98
0
882
35
24
17
22
1.95
8581--9039
209
2.2
210
98
0
884
35
25
17
22
1.95
10996--11029
2
17.0
2
87
0
50
47
2
2
47
1.32
10993--11029
12
3.1
12
92
0
56
45
5
2
45
1.40
11103--11146
21
2.1
21
83
8
54
15
15
0
68
1.22
11143--11198
21
2.8
18
78
19
58
28
3
1
66
1.19
14140--14246
30
3.6
30
83
3
144
40
11
10
38
1.75
14113--14269
61
2.6
60
75
12
169
43
9
10
36
1.71
14995--15042
17
2.9
17
87
6
64
54
0
0
45
0.99
22403--22611
75
2.8
76
86
2
278
24
32
22
20
1.98
24508--24551
21
2.1
21
82
0
52
9
43
15
31
1.79
25608--25646
20
2.0
20
89
0
60
30
33
15
20
1.94
27024--27070
18
2.6
18
77
16
51
74
2
4
19
1.09
27203--27244
17
2.5
17
100
0
84
42
4
9
42
1.58
28020--28057
19
2.0
19
85
10
51
7
21
5
65
1.38
28810--28910
45
2.3
45
81
5
116
34
14
21
28
1.93
28938--28975
20
1.9
20
94
0
67
31
18
23
26
1.97
33096--33169
20
3.7
20
94
0
130
20
21
36
21
1.95
33483--33525
21
2.0
23
86
9
63
46
9
9
34
1.68
45759--45801
17
2.2
20
73
26
56
32
16
6
44
1.74
45765--45801
17
2.2
17
100
0
74
32
16
5
45
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46896--46927
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!