Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003545.1 Hibiscus syriacus cultivar Beakdansim tig00007477_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  173267

Tables:   1   2   

This is table  2  of  2  ( 131 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141689--141763
6
12.5
6
100
0
150
0
16
50
33
1.45
141841--141884
20
2.2
20
91
0
70
11
18
15
54
1.70
141871--142145
20
13.6
20
78
7
153
19
22
19
38
1.93
141873--142020
40
3.7
40
87
0
197
22
24
17
35
1.95
141873--142020
60
2.5
60
87
4
226
22
24
17
35
1.95
142095--142145
19
2.6
20
90
3
77
15
17
23
43
1.88
150889--150928
20
1.9
19
85
14
53
15
17
5
62
1.49
151400--151443
3
14.7
3
90
9
72
63
2
0
34
1.07
157173--157216
17
2.5
17
79
13
54
18
4
11
65
1.40
160806--160844
16
2.4
16
86
4
60
25
2
0
71
0.98
171074--171158
40
2.2
39
93
2
143
40
20
15
24
1.91

Tables:   1   2

The End!