Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003577.1 Hibiscus syriacus cultivar Beakdansim tig00007550_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  203375

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172892--173001
29
3.8
29
97
2
204
44
16
21
17
1.86
173086--173119
15
2.3
15
94
0
59
14
20
32
32
1.93
175143--175192
21
2.4
21
93
0
82
28
18
16
38
1.91
181800--181847
3
16.7
3
82
8
55
35
0
0
64
0.94
181801--181875
29
2.5
31
82
6
82
38
4
1
56
1.27
184535--184697
63
2.6
64
76
4
170
28
17
23
30
1.97
187973--188085
60
1.9
60
85
10
160
35
22
3
38
1.71
188221--188393
61
2.9
59
82
6
172
43
5
20
30
1.75
188264--188393
60
2.1
61
81
4
156
43
5
19
31
1.73

Tables:   1   2

The End!