Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003637.1 Hibiscus syriacus cultivar Beakdansim tig00007703_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72786

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--719
110
6.5
112
89
6
1056
36
14
20
27
1.92
982--1046
3
22.0
3
85
14
91
32
0
0
67
0.91
982--1046
19
3.5
19
83
16
91
32
0
0
67
0.91
982--1046
25
2.9
22
82
14
87
32
0
0
67
0.91
2520--2564
21
2.1
21
84
8
56
28
4
0
66
1.11
4937--4969
15
2.3
15
89
5
50
60
0
3
36
1.12
20159--20200
22
1.9
23
85
9
61
61
7
14
16
1.53
22158--22189
16
2.0
16
100
0
64
12
6
31
50
1.65
39949--39998
15
3.3
15
82
0
73
28
30
24
18
1.97
54008--54032
2
12.5
2
100
0
50
48
0
0
52
1.00
56337--56497
40
4.0
40
100
0
322
22
17
12
47
1.81
60040--60067
14
2.0
14
100
0
56
7
0
0
92
0.37
62089--62195
20
5.3
20
70
10
83
26
23
19
30
1.98
65396--65665
140
1.9
140
97
0
513
27
13
15
42
1.85
65636--65781
20
7.7
20
78
9
153
31
22
18
27
1.97
65664--65690
14
1.9
14
100
0
54
48
29
14
7
1.71
65927--65988
14
4.3
14
77
6
61
46
12
0
40
1.42
67977--68019
20
2.3
19
84
8
52
37
27
16
18
1.92
68303--68347
20
2.2
20
84
7
56
40
26
15
17
1.90
68565--68614
18
2.8
18
90
0
82
44
8
18
30
1.78
70343--70416
20
3.7
20
87
0
85
44
24
16
14
1.85
70812--70854
22
2.0
22
95
0
77
18
16
41
23
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71029--71146
20
5.9
20
86
4
148
26
21
22
29
1.99

Tables:   1

The End!