Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003657.1 Hibiscus syriacus cultivar Beakdansim tig00007777_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91269

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7914--7966
20
2.7
20
100
0
106
37
16
28
16
1.91
8381--8836
54
8.4
54
86
3
632
30
16
18
34
1.93
8381--8836
217
2.1
216
89
3
686
30
16
18
34
1.93
15307--15760
54
8.4
53
88
4
644
31
17
16
34
1.93
15319--15760
162
2.7
162
91
1
717
31
17
16
34
1.93
16422--16495
36
2.1
36
94
0
130
32
24
10
32
1.90
18752--18778
14
1.9
14
100
0
54
48
37
0
14
1.45
21295--21366
2
36.5
2
97
2
137
51
0
0
48
1.00
28208--28236
14
2.1
14
100
0
58
20
13
27
37
1.91
30517--30552
17
2.1
18
89
5
56
2
22
2
72
1.11
31177--31202
3
8.7
3
100
0
52
34
0
0
65
0.93
36366--36489
64
1.9
64
88
3
187
33
28
23
14
1.94
39026--39147
25
4.9
25
84
3
138
18
1
31
48
1.58
39040--39162
25
5.0
24
80
11
117
21
1
31
45
1.61
39040--39162
49
2.5
49
82
10
153
21
1
31
45
1.61
39213--39303
27
3.4
26
82
11
103
56
8
6
28
1.55
40182--40285
51
2.0
51
100
0
208
36
15
17
30
1.91
40962--41024
30
2.1
30
93
0
108
34
6
17
41
1.75
42545--42592
8
6.0
8
85
0
60
33
0
35
31
1.58
42543--42618
16
4.6
16
75
15
75
34
0
31
34
1.58
42543--42618
24
3.0
26
75
11
86
34
0
31
34
1.58
42677--43924
170
7.4
170
84
1
1423
28
18
18
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43985--44041
2
28.5
2
100
0
114
0
0
49
50
1.00
44694--47611
4
726.5
4
85
9
3471
26
1
24
46
1.61
49026--49103
21
3.7
21
70
10
68
24
12
17
44
1.84
55858--55934
21
3.6
21
74
10
84
23
12
20
42
1.87
56836--57048
108
2.0
105
95
2
381
22
19
12
46
1.82
58754--58790
17
2.3
16
90
9
58
32
2
0
64
1.07
59714--59765
2
26.0
2
100
0
104
50
0
0
50
1.00
61256--61310
29
1.9
28
92
3
92
23
18
9
49
1.76
67163--67197
16
2.2
16
100
0
70
42
0
0
57
0.99
69604--69879
2
144.5
2
70
20
164
40
2
3
53
1.32
69606--69820
47
4.6
46
78
16
212
40
1
3
54
1.27
69603--69880
7
39.3
7
73
19
163
39
2
3
53
1.31
69604--69879
72
4.0
71
79
13
270
40
2
3
53
1.32
69613--69866
13
19.2
13
69
20
88
39
1
4
54
1.32
71094--71163
34
2.1
34
81
5
79
25
8
1
64
1.30
73048--73420
54
6.9
53
88
5
475
27
19
21
32
1.97
73032--73420
162
2.4
162
86
4
543
26
19
21
32
1.97
74427--74478
22
2.5
22
87
9
74
38
17
15
28
1.90
74829--75489
54
12.2
54
86
4
820
32
21
19
27
1.97
87729--87807
22
3.6
22
84
5
106
36
26
15
21
1.93
87732--87802
23
3.1
23
84
8
92
33
29
15
21
1.94
88667--88740
22
3.3
22
77
7
87
24
16
27
32
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88667--88737
23
3.1
23
81
2
90
23
16
28
30
1.97
88683--88748
22
3.0
22
82
4
87
24
18
25
31
1.97

Tables:   1

The End!