Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003774.1 Hibiscus syriacus cultivar Beakdansim tig00008078_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70816

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7416--7478
2
32.0
2
96
3
119
50
0
0
49
1.00
9034--9099
23
2.9
23
95
0
114
27
22
19
30
1.98
16207--16262
24
2.5
22
81
16
69
46
0
1
51
1.11
23157--23266
31
3.4
31
71
14
96
22
21
18
37
1.94
23141--23265
66
1.9
66
91
0
205
21
22
20
35
1.96
30555--30581
7
3.9
7
100
0
54
29
29
25
14
1.95
33578--33879
149
2.0
148
90
0
469
26
15
21
36
1.94
34077--34137
21
2.9
21
80
4
61
49
1
18
31
1.57
34079--34144
33
2.0
33
82
5
80
50
1
16
31
1.55
41866--41922
21
2.6
22
75
10
64
63
1
1
33
1.15
50919--50952
12
2.8
12
86
4
50
52
0
5
41
1.25
50929--50982
21
2.5
21
85
8
65
55
0
3
40
1.17
52699--52764
34
2.0
34
85
8
93
31
24
18
25
1.97
57315--57543
72
3.3
70
86
5
304
36
17
11
35
1.85
62532--62638
34
3.2
33
69
19
94
41
5
10
42
1.62
62481--62666
68
2.7
68
89
2
266
39
5
11
44
1.63
62545--62651
34
3.2
33
67
19
85
40
6
8
44
1.61
65193--65238
19
2.4
18
89
7
65
52
2
0
45
1.13
66066--66106
18
2.4
17
83
4
55
53
0
2
43
1.13
68395--68458
23
2.8
22
85
4
83
26
26
26
20
1.99
68474--68643
94
1.8
92
88
8
263
34
24
15
26
1.95
69147--69184
20
1.9
20
88
0
58
10
31
34
23
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70392--70519
63
2.0
65
89
4
197
39
4
10
44
1.60

Tables:   1

The End!