Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003940.1 Hibiscus syriacus cultivar Beakdansim tig00008513_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  168851

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160369--160468
21
4.7
21
87
4
146
26
18
35
21
1.95
160369--160468
44
2.3
42
93
3
164
26
18
35
21
1.95
160548--160608
31
2.0
31
87
9
90
44
18
4
32
1.71
161876--161923
19
2.5
20
82
3
62
29
12
6
52
1.63
163133--163180
21
2.3
21
88
0
69
25
25
22
27
2.00
163219--163297
41
1.9
41
89
0
122
27
22
26
22
1.99
163226--163297
20
3.5
20
79
3
81
29
20
27
22
1.99
163335--163378
22
2.0
23
90
4
72
22
20
31
25
1.98
163364--163461
21
4.7
21
88
2
144
26
18
33
21
1.96
163329--163461
63
2.1
63
84
13
168
25
19
33
21
1.97
163364--163461
42
2.3
42
92
3
162
26
18
33
21
1.96
163541--163598
30
2.0
29
90
10
91
44
15
5
34
1.69
163541--163600
29
2.0
30
93
6
104
43
15
6
35
1.72
165772--165841
34
2.1
32
86
5
95
21
30
17
31
1.96
166125--166172
21
2.3
21
88
0
78
27
25
20
27
1.99
166219--166289
20
3.5
20
80
3
79
28
22
28
21
1.99
166210--166289
41
2.0
41
87
5
117
26
25
27
21
1.99
166311--166411
21
4.8
21
73
9
89
24
18
33
22
1.97
166310--166411
42
2.5
40
78
12
107
24
18
33
23
1.97
166491--166548
30
2.0
29
90
10
91
44
15
5
34
1.69
166491--166550
29
2.0
30
93
6
104
43
15
6
35
1.72
166997--167048
26
2.0
26
85
3
70
36
11
7
44
1.70

Tables:   1   2

The End!