Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004036.1 Hibiscus syriacus cultivar Beakdansim tig00008817_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58611

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3667--3715
16
2.9
16
84
6
53
61
0
22
16
1.34
7765--7813
16
2.9
16
84
6
53
61
0
22
16
1.34
8833--8871
19
1.9
19
85
10
51
53
7
2
35
1.43
12075--12211
59
2.3
59
88
2
204
29
22
18
29
1.97
14682--14738
23
2.5
23
79
0
69
33
22
26
17
1.96
15495--15528
15
2.3
15
94
0
59
20
29
14
35
1.93
19601--19663
23
2.7
23
80
0
81
30
23
28
17
1.97
20422--20455
15
2.3
15
89
0
50
20
29
11
38
1.88
23095--23275
59
3.1
59
94
1
317
23
17
24
34
1.96
31724--31790
24
2.8
24
75
18
68
32
26
20
19
1.97
31728--31820
45
2.0
46
81
8
109
35
26
18
19
1.95
37611--37637
10
2.7
10
100
0
54
51
11
18
18
1.74
37631--37700
25
2.8
25
95
0
122
38
27
14
20
1.91
38316--38408
45
2.0
46
83
4
116
36
24
20
18
1.95
50035--50110
37
2.1
36
85
7
100
46
13
21
19
1.84
50345--50390
20
2.4
19
85
10
58
26
0
13
60
1.32
51934--51976
6
6.6
7
84
10
56
44
0
0
55
0.99
51945--51977
2
17.0
2
93
6
59
48
0
0
51
1.00
53279--53327
3
16.3
3
80
16
57
59
0
0
40
0.98
53279--53327
12
3.8
13
82
17
66
59
0
0
40
0.98
53480--53888
76
5.4
76
97
1
759
34
21
20
23
1.96
53480--53888
151
2.7
151
96
1
757
34
21
20
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54640--54691
22
2.4
22
93
0
95
40
13
11
34
1.81
57208--57416
113
1.9
108
84
4
274
30
18
15
35
1.92

Tables:   1

The End!