Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004077.1 Hibiscus syriacus cultivar Beakdansim tig00008923_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64733

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12021--12073
24
2.2
24
79
0
61
62
20
7
9
1.50
12528--12803
92
3.0
92
98
0
525
46
15
5
33
1.69
16103--16128
3
8.7
3
100
0
52
65
0
34
0
0.93
16151--16176
5
5.2
5
100
0
52
80
0
19
0
0.71
21313--21341
14
2.1
14
100
0
58
6
24
20
48
1.74
21875--22071
105
1.9
105
93
0
340
28
24
25
21
1.99
23213--23259
20
2.4
19
86
10
60
44
2
2
51
1.25
23258--23331
23
3.2
24
77
9
82
50
1
2
45
1.24
23258--23321
25
2.6
26
78
11
82
51
1
3
43
1.26
29566--29645
33
2.4
34
83
8
101
40
35
11
13
1.81
29647--29707
30
2.1
29
90
3
95
42
26
8
22
1.81
30500--30530
6
5.0
6
92
7
53
16
35
0
48
1.46
30500--30530
13
2.5
12
94
5
53
16
35
0
48
1.46
36268--36323
27
2.2
26
81
9
69
35
1
1
60
1.17
36279--36331
27
2.0
27
96
3
99
30
3
3
62
1.30
38965--39004
21
2.0
19
85
9
53
45
0
0
55
0.99
39594--39652
30
1.9
31
89
3
93
38
11
23
25
1.89
44516--44599
23
3.7
23
85
0
114
27
25
27
20
1.99
44519--44629
46
2.4
46
80
5
127
30
23
25
20
1.99
44821--44880
31
2.0
31
83
9
79
35
21
3
40
1.70
51465--51509
23
2.0
23
90
0
72
31
26
24
17
1.97
51473--51538
23
2.9
23
84
4
80
33
25
21
19
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51756--51814
31
1.9
31
83
10
77
32
23
3
40
1.71
52159--52314
64
2.4
64
81
8
167
26
21
20
32
1.98
52839--52864
13
2.0
13
100
0
52
69
0
30
0
0.89
53497--53547
16
3.1
17
81
13
54
25
0
3
70
1.04
57580--57618
16
2.5
15
84
8
51
33
0
0
66
0.92

Tables:   1

The End!