Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004107.1 Hibiscus syriacus cultivar Beakdansim tig00008985_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56527

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7302--7371
21
3.2
21
67
18
54
17
20
22
40
1.92
12770--12841
25
2.6
29
76
21
89
40
5
29
25
1.78
12781--12837
25
2.3
25
100
0
114
36
5
31
26
1.79
16108--16181
37
2.0
37
94
0
130
25
41
4
28
1.73
16108--16201
37
2.5
37
87
3
107
27
40
4
27
1.75
16229--16291
12
5.2
12
80
0
63
34
42
7
14
1.75
20298--20351
21
2.6
20
75
18
56
42
3
1
51
1.30
20408--20609
22
9.3
21
76
15
155
43
4
2
49
1.38
20376--20590
22
9.4
23
75
14
153
42
5
3
48
1.42
20378--20586
46
4.6
46
79
4
228
43
5
3
47
1.43
20414--20611
89
2.2
88
82
6
213
43
4
2
49
1.36
22436--22645
104
2.0
104
100
0
420
31
20
16
31
1.94
23933--23963
2
15.5
2
100
0
62
51
0
0
48
1.00
28581--28916
94
3.6
93
77
11
278
47
3
5
43
1.44
38099--38206
43
2.5
43
92
0
171
29
19
25
25
1.98
43141--43222
21
3.9
21
75
7
76
14
24
34
26
1.94
43138--43222
20
4.1
20
72
11
80
15
24
32
27
1.95
52127--52220
34
2.8
35
78
15
108
41
9
3
45
1.53
52398--52434
3
13.0
3
88
11
60
35
0
0
64
0.94
52604--52679
29
2.6
29
87
4
100
38
15
21
25
1.92
55499--55538
14
2.7
15
84
7
55
50
0
12
37
1.41

Tables:   1

The End!