Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000412.1 Hibiscus syriacus cultivar Beakdansim tig00000758_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62826

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4150--4182
16
2.1
16
94
0
57
54
24
12
9
1.66
4563--4592
10
3.0
10
90
0
51
60
16
10
13
1.59
4556--4608
24
2.1
26
86
6
74
58
16
9
15
1.62
12334--12413
24
3.3
24
83
0
88
17
13
16
52
1.75
12728--12760
16
2.0
17
94
5
59
18
0
6
75
1.00
14087--14192
31
3.4
31
77
2
104
43
3
5
47
1.45
14124--14184
32
1.9
32
82
0
77
44
4
8
42
1.55
20861--21000
70
2.0
70
98
0
271
25
19
18
36
1.94
24893--25145
132
1.9
129
81
7
305
32
15
24
27
1.95
35123--35155
15
2.2
15
89
10
50
63
3
3
30
1.24
36346--36386
10
4.1
10
84
12
57
31
29
0
39
1.57
36512--36844
111
3.0
111
95
0
594
35
7
11
45
1.69
38364--38425
27
2.3
26
86
5
79
22
27
16
33
1.95
38731--38788
18
3.6
18
67
26
56
34
18
32
13
1.91
38731--38787
15
3.8
15
76
0
60
33
19
33
14
1.91
44843--44915
30
2.4
30
81
4
85
50
5
2
41
1.40
47167--47201
17
2.1
17
89
10
54
54
0
5
40
1.24
47404--47789
194
2.0
191
84
4
499
36
15
10
38
1.82
49938--49969
15
2.2
14
94
5
55
75
0
0
25
0.81
50301--50348
22
2.1
24
84
7
64
66
0
2
31
1.03
50301--50348
23
2.1
23
84
7
62
66
0
2
31
1.03
51264--51310
21
2.2
21
92
0
76
27
29
21
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57234--57264
15
2.1
15
94
5
55
45
6
16
32
1.72
57232--57266
14
2.5
13
86
13
52
48
8
14
28
1.73

Tables:   1

The End!