Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004130.1 Hibiscus syriacus cultivar Beakdansim tig00009036_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105088

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91847--92210
180
2.0
184
89
4
567
29
22
18
29
1.97
92018--92435
140
3.0
139
90
2
644
29
21
18
30
1.97
91398--92435
45
23.2
45
67
10
289
29
22
19
28
1.98
92971--93025
15
3.5
15
71
9
56
38
14
25
21
1.92
92902--93351
39
13.0
34
71
14
148
37
15
21
25
1.93
92900--93021
62
1.9
64
82
12
153
36
16
23
23
1.94
92902--93091
98
1.9
98
89
2
292
36
14
24
24
1.93
93000--93338
67
4.9
67
89
4
410
37
15
20
26
1.92
93104--93221
30
3.7
30
71
22
105
38
15
20
26
1.92
93199--93433
39
6.0
39
87
3
321
36
16
17
29
1.92
93199--93433
78
3.0
78
89
1
364
36
16
17
29
1.92
93436--93597
75
2.1
75
88
1
234
43
12
13
30
1.81
94960--95048
9
9.4
9
75
11
54
5
11
2
80
0.96
94987--95037
12
4.2
12
79
2
57
5
5
1
86
0.78
94955--95019
29
2.3
28
81
5
76
3
13
1
81
0.88
94956--95048
20
4.5
20
79
11
89
5
11
2
80
0.96
94986--95064
34
2.2
35
82
10
90
8
8
2
79
1.01
101071--101112
20
2.3
19
84
12
52
28
19
21
30
1.97

Tables:   1   2

The End!