Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004250.1 Hibiscus syriacus cultivar Beakdansim tig00009318_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  394940

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
338103--338207
36
2.9
36
92
1
167
29
35
4
30
1.78
342048--342152
36
2.9
36
94
1
176
31
35
4
28
1.78
342051--342135
11
7.2
11
69
22
57
32
35
3
28
1.74
346478--346525
19
2.5
20
89
3
71
43
6
14
35
1.71
352580--352630
20
2.6
20
90
3
77
37
13
5
43
1.69
365147--365231
11
7.2
11
72
22
66
31
36
3
28
1.74
365144--365248
36
2.9
36
95
1
185
30
36
4
28
1.78
365564--365643
35
2.2
37
86
4
110
27
3
36
32
1.75
369840--369890
24
2.1
24
86
13
70
78
5
15
0
0.93
369848--369894
11
4.1
11
82
15
51
80
2
17
0
0.80
384158--384189
14
2.3
14
94
0
55
0
6
9
84
0.78
392898--392956
26
2.3
27
85
5
77
69
8
5
16
1.32

Tables:   1   2

The End!