Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004297.1 Hibiscus syriacus cultivar Beakdansim tig00009428_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83336

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1173--1217
21
2.1
21
83
0
54
46
8
0
44
1.34
1580--1622
15
2.9
15
85
0
59
16
62
9
11
1.53
2795--2846
20
2.6
20
81
6
52
34
3
1
59
1.27
7155--7203
17
2.9
17
77
14
57
38
0
61
0
0.96
11526--11565
18
2.2
18
95
0
71
25
30
10
35
1.88
12112--12573
225
2.1
217
88
5
685
28
14
17
38
1.90
29523--29583
24
2.5
24
87
12
97
40
1
6
50
1.38
31088--31120
11
2.8
12
81
9
50
6
6
12
75
1.16
31922--31965
20
2.2
20
100
0
88
18
27
15
38
1.91
41583--41625
13
3.2
13
80
9
50
83
11
2
2
0.83
41576--41634
24
2.5
22
76
20
57
81
8
8
1
0.95
41672--41705
9
3.8
9
92
7
52
79
2
17
0
0.86
42451--42806
43
7.4
43
62
20
118
34
24
19
21
1.96
42441--42970
98
5.4
98
96
0
943
33
23
19
22
1.97
44795--44827
11
2.8
12
81
9
50
6
6
12
75
1.16
46575--46650
31
2.5
31
82
4
100
35
1
10
52
1.44
48122--48160
2
19.5
2
100
0
78
51
0
0
48
1.00
48126--48174
12
4.1
12
91
0
62
55
2
0
42
1.11
57688--57737
20
2.6
19
74
20
50
50
0
4
46
1.20
65730--65790
31
2.0
31
100
0
122
29
24
19
26
1.99
68159--68583
219
1.9
219
99
0
841
28
16
20
34
1.95

Tables:   1

The End!