Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004556.1 Hibiscus syriacus cultivar Beakdansim tig00010118_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69173

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2892--3067
90
2.0
90
93
0
298
46
6
9
37
1.62
14715--14753
21
1.9
21
84
5
53
30
15
15
38
1.88
30516--30955
55
8.0
55
87
1
603
34
10
19
35
1.86
32197--32235
3
13.3
3
89
5
62
69
2
0
28
1.02
32190--32233
20
2.1
21
91
4
72
70
2
0
27
0.99
32190--32235
23
2.1
21
92
8
74
69
2
0
28
1.00
36756--36816
30
2.0
30
84
6
79
34
24
6
34
1.81
37990--38293
130
2.3
133
87
3
418
24
16
30
27
1.97
38318--38492
66
2.6
66
88
5
255
39
15
20
24
1.91
38463--38522
21
2.9
21
92
0
93
40
15
23
21
1.91
38421--38583
87
1.9
87
87
2
238
37
14
23
24
1.92
39937--39980
8
5.9
8
82
15
58
0
13
9
77
0.99
39940--39979
21
1.9
21
89
0
62
0
12
10
77
0.99
44711--44745
3
11.7
3
87
0
52
65
2
2
28
1.21
44786--44832
18
2.6
19
83
10
62
53
2
4
40
1.32
45299--45333
17
2.1
17
100
0
70
22
40
17
20
1.92
58483--58513
15
2.1
15
93
0
53
22
0
67
9
1.19
60088--60149
28
2.3
27
83
10
74
51
6
3
38
1.44
62046--62108
29
2.1
30
85
2
83
38
22
3
36
1.70
64407--64440
18
1.9
18
88
5
52
26
26
8
38
1.85
64770--64830
15
4.2
15
80
13
58
31
0
0
68
0.89
64782--64830
15
3.3
14
81
13
62
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64783--64831
16
3.1
16
74
14
57
34
0
0
65
0.93
67210--67256
3
15.7
3
86
8
69
36
0
2
61
1.08

Tables:   1

The End!