Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004597.1 Hibiscus syriacus cultivar Beakdansim tig00010271_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  225727

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185132--185837
233
3.0
232
92
1
1164
36
17
18
26
1.94
189018--189044
14
1.9
14
100
0
54
22
11
7
59
1.56
192275--192313
16
2.6
14
84
15
51
82
0
17
0
0.68
192268--192313
10
4.4
10
86
5
56
82
0
15
2
0.76
192275--192313
17
2.5
15
88
12
53
82
0
17
0
0.68
193246--193934
136
5.1
136
85
2
862
34
16
21
26
1.95
193855--194034
96
1.9
96
83
0
234
34
18
16
30
1.94
193718--194426
233
3.0
233
93
0
1202
36
17
19
26
1.94
194088--194263
96
1.8
96
85
0
244
33
19
17
30
1.94
198921--198974
3
18.0
3
88
0
81
61
0
0
38
0.96
199122--199404
124
2.3
122
84
7
344
23
17
15
43
1.87
199351--199439
36
2.5
36
94
0
151
20
21
10
48
1.78
199493--199595
38
2.6
39
89
7
145
23
22
10
43
1.84
199521--199582
19
3.3
19
70
17
56
20
24
12
41
1.87
199334--199710
154
2.5
147
89
6
573
27
20
12
39
1.88
199538--200403
113
7.7
113
89
4
1234
27
19
14
37
1.91
199536--200403
338
2.6
335
87
6
1272
28
19
14
37
1.91
199536--200403
451
1.9
448
96
1
1621
28
19
14
37
1.91
201101--201416
115
2.8
115
94
0
535
32
20
12
33
1.90
201368--201589
83
2.7
83
91
0
345
39
21
11
27
1.88
202574--202699
19
6.6
19
68
18
68
48
5
10
35
1.61
202552--202732
95
1.9
95
100
0
362
48
6
11
34
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
202552--202756
95
2.2
95
91
4
283
47
6
11
34
1.66
213590--213646
26
2.2
26
78
6
62
63
3
5
28
1.33
215586--215656
3
23.0
3
80
5
79
59
0
0
40
0.98
218192--218252
27
2.3
26
78
10
70
47
3
11
37
1.56

Tables:   1   2

The End!