Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004614.1 Hibiscus syriacus cultivar Beakdansim tig00010320_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  491648

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
441144--441180
19
1.9
19
94
0
65
35
8
35
21
1.83
444099--444128
13
2.4
13
94
5
53
26
30
0
43
1.55
452964--453021
8
7.0
8
83
13
73
75
0
22
1
0.89
452953--453014
5
12.8
5
75
16
60
77
0
20
1
0.85
461736--461785
11
4.6
11
78
14
59
78
0
22
0
0.76
461748--461789
8
5.0
8
81
18
50
76
0
23
0
0.79
461737--461782
5
9.8
5
77
13
53
78
0
21
0
0.76
461737--461780
18
2.4
18
88
11
63
77
0
22
0
0.77
463869--463900
16
2.0
16
93
0
55
31
18
3
46
1.65
465285--465343
29
2.0
29
100
0
118
42
13
10
33
1.78
473751--473793
23
1.9
21
81
13
50
34
13
18
32
1.90
477059--477097
20
1.9
21
84
5
53
33
0
38
28
1.57
485227--485290
8
7.5
8
74
22
51
1
20
3
75
1.03
485220--485256
19
1.9
19
89
10
58
0
27
0
72
0.84
485241--485292
17
2.9
18
81
18
65
1
19
5
73
1.14
485220--485290
27
2.6
28
77
16
78
1
22
2
73
1.05
487886--487937
19
2.6
21
87
6
81
44
7
15
32
1.75
488830--488883
24
2.3
24
93
3
92
20
18
24
37
1.94
489545--489717
90
1.9
91
89
3
269
27
23
27
21
1.99

Tables:   1   2

The End!