Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004917.1 Hibiscus syriacus cultivar Beakdansim tig00011072_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109818

Tables:   1   2   

This is table  2  of  2  ( 131 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79337--79435
3
33.0
3
97
0
189
65
0
1
33
0.99
81038--81117
2
42.5
2
78
12
71
48
1
0
50
1.08
98489--98564
7
11.6
7
73
23
67
65
1
0
32
1.01
98489--98565
19
4.0
20
82
17
85
64
1
0
33
1.01
98488--98564
34
2.4
34
77
18
83
66
1
0
32
1.00
98490--98565
12
7.0
11
75
24
63
64
1
0
34
1.02
98591--98639
20
2.3
22
75
13
57
44
4
4
46
1.41
98616--98727
38
2.9
38
78
15
122
41
5
7
46
1.54
98758--98823
28
2.4
28
84
5
80
39
3
3
54
1.31
98787--98838
19
2.6
20
81
9
61
42
3
1
51
1.31
105817--105873
27
2.2
26
90
3
87
29
28
19
22
1.98

Tables:   1   2

The End!