Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004921.1 Hibiscus syriacus cultivar Beakdansim tig00011081_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  105985

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4292--4322
7
4.4
7
95
0
53
61
16
0
22
1.34
13385--13423
19
2.1
19
90
0
60
61
0
10
28
1.28
19116--19153
5
7.6
5
90
0
58
21
2
39
36
1.67
21193--21222
13
2.2
14
94
5
53
40
13
26
20
1.89
24035--24078
21
2.0
21
86
4
61
52
2
9
36
1.46
35692--35717
13
2.0
13
100
0
52
76
0
0
23
0.78
42958--42997
21
1.9
21
84
0
53
52
15
7
25
1.68
45569--45610
22
1.9
22
100
0
84
23
23
14
38
1.92
50831--51677
6
141.5
6
97
2
1598
49
16
0
33
1.46
51956--51990
18
1.9
18
94
0
61
25
34
20
20
1.96
54781--54838
23
2.5
23
100
0
116
29
25
27
17
1.97
59986--60110
31
4.0
31
96
2
225
38
24
19
18
1.93
60762--60923
64
2.5
64
81
4
184
30
17
19
33
1.94
61461--61489
3
9.7
3
100
0
58
65
0
34
0
0.93
67796--67886
23
4.0
23
88
0
137
28
26
27
17
1.98
70757--70817
23
2.7
23
84
0
86
34
27
22
14
1.94
73315--73372
20
2.6
22
89
10
84
25
22
20
31
1.98
73361--73521
64
2.5
63
83
4
205
25
25
17
31
1.97
74878--74958
21
3.9
21
86
0
117
29
17
27
25
1.97
76502--76569
21
3.3
20
72
22
52
45
7
1
45
1.40
81903--81940
10
3.8
10
89
0
58
28
28
0
42
1.56
81982--82022
18
2.3
18
87
4
57
29
7
2
60
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86343--86376
12
2.8
12
90
4
50
64
5
2
26
1.30
91833--91863
16
1.9
16
100
0
62
29
19
32
19
1.96
94515--94551
19
1.9
19
94
0
65
35
5
32
27
1.79
102980--103119
71
2.0
71
98
1
273
41
22
11
25
1.87

Tables:   1

The End!