Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004929.1 Hibiscus syriacus cultivar Beakdansim tig00011093_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  209567

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
188376--188460
33
2.5
33
88
5
118
14
22
18
44
1.85
188443--188511
20
3.5
20
84
4
95
17
20
24
37
1.93
188374--188530
34
4.5
33
76
16
111
15
22
22
40
1.91
191838--191903
20
3.3
20
95
2
116
22
18
25
33
1.97
191838--191923
39
2.2
40
83
6
104
23
17
25
33
1.96
191917--192044
20
6.4
20
87
4
170
21
19
20
39
1.93
191917--192044
41
3.2
40
88
3
170
21
19
20
39
1.93
192051--192096
21
2.2
21
92
0
74
39
17
26
17
1.91
207019--207079
23
2.7
23
92
2
97
18
26
32
22
1.97

Tables:   1   2

The End!