Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004985.1 Hibiscus syriacus cultivar Beakdansim tig00011185_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  383687

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
351467--351580
9
12.0
9
77
10
111
14
24
31
29
1.94
351575--351607
17
1.9
17
100
0
66
18
48
21
12
1.80
352503--352626
63
2.0
63
81
9
146
16
26
29
27
1.97
358815--358912
19
5.2
18
82
12
108
14
27
30
27
1.95
358804--358912
29
3.8
29
80
11
118
14
27
29
28
1.95
358814--358912
38
2.6
37
82
9
119
15
27
30
27
1.96
358909--358951
22
2.0
22
100
0
86
18
48
23
9
1.76
358941--358971
7
4.4
7
100
0
62
16
29
29
25
1.96
359842--359918
31
2.5
31
82
2
100
14
25
31
28
1.95
359842--359965
63
2.0
63
80
6
144
17
27
28
26
1.98
364325--364365
16
2.6
16
84
0
55
70
0
14
14
1.16
364582--364620
17
2.2
17
86
13
53
0
15
7
76
0.99
368885--368914
13
2.4
13
94
5
53
26
30
0
43
1.55
372134--372178
8
5.5
8
82
12
56
0
24
2
73
0.95
372127--372179
17
3.5
15
85
14
65
0
22
1
75
0.90
372432--372489
19
3.0
20
83
14
61
65
0
10
24
1.23
376052--376131
35
2.2
37
88
4
119
28
3
36
31
1.75
381659--381738
35
2.2
37
86
4
110
27
2
36
33
1.70

Tables:   1   2

The End!