Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004997.1 Hibiscus syriacus cultivar Beakdansim tig00011218_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77739

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1920--1981
31
2.1
30
85
11
83
29
1
11
58
1.42
2312--2359
19
2.5
19
96
0
87
33
18
27
20
1.96
13669--14060
187
2.1
185
89
4
585
44
8
4
43
1.53
16873--17059
75
2.5
76
79
3
209
52
13
5
28
1.63
16979--17007
12
2.5
12
94
5
51
62
10
0
27
1.28
18859--19225
131
2.8
131
83
2
443
42
15
10
31
1.81
21256--21367
3
37.3
3
90
0
179
62
0
0
35
1.08
21588--21775
90
2.1
92
96
2
353
30
20
20
28
1.97
21588--21796
90
2.3
92
93
3
343
31
19
20
29
1.97
26699--26745
25
1.9
25
91
4
78
36
12
2
48
1.53
31901--31945
21
2.1
21
84
8
56
8
0
20
71
1.12
44040--44088
21
2.3
21
100
0
98
34
10
12
42
1.76
47236--47274
17
2.3
17
90
0
60
46
2
0
51
1.14
47229--47279
25
2.0
27
88
7
79
45
1
0
52
1.12
47337--47427
27
3.4
26
78
13
78
48
2
0
49
1.13
47730--47782
26
2.0
27
88
3
81
56
0
0
43
0.99
48215--48326
54
2.1
54
91
0
179
30
12
10
46
1.76
49299--49333
16
2.2
16
89
0
52
45
0
2
51
1.16
50333--50370
14
2.8
13
84
7
58
55
0
10
34
1.34
56608--56840
77
3.0
77
74
10
229
38
9
15
37
1.79
56910--57116
74
2.8
73
75
5
191
44
6
12
35
1.69
57344--57562
76
2.9
76
84
4
228
36
14
13
35
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57382--57562
76
2.4
77
89
3
276
34
14
13
37
1.86
57788--58113
154
2.1
155
88
2
476
36
10
11
41
1.76
57995--58032
20
1.9
20
94
0
67
34
7
18
39
1.80
58084--58133
20
2.5
20
96
3
93
36
14
6
44
1.69
58247--58530
77
3.7
77
84
3
326
36
17
10
35
1.84
58218--58530
154
2.0
153
84
4
409
37
17
9
34
1.84
58796--58835
22
1.9
20
85
10
53
22
20
2
55
1.56
60312--60476
76
2.2
75
86
3
233
30
3
10
55
1.49
60434--60496
19
3.2
19
75
4
54
31
0
12
55
1.37
60497--60541
19
2.2
20
84
7
56
31
0
15
53
1.43
61116--61144
12
2.3
13
94
5
51
24
0
0
75
0.80
62913--62945
15
2.2
15
94
0
57
45
24
24
6
1.75
66845--66882
18
2.1
19
90
5
60
10
2
5
81
0.94
66978--67091
53
2.2
52
91
1
183
41
15
22
20
1.90
68761--68822
19
3.2
19
75
9
54
30
0
12
56
1.37
68641--68799
74
2.1
74
86
6
225
30
2
11
55
1.48
69516--69548
6
5.7
6
89
7
50
9
3
0
87
0.63
70551--70614
20
3.2
20
71
22
62
39
20
29
10
1.87
76012--76044
17
1.9
17
100
0
66
30
18
12
39
1.87
76003--76225
103
2.2
103
85
3
297
35
18
15
30
1.92

Tables:   1

The End!