Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005029.1 Hibiscus syriacus cultivar Beakdansim tig00011284_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62090

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11217--11255
2
19.5
2
100
0
78
51
0
0
48
1.00
21061--21102
21
2.0
21
95
0
75
26
28
21
23
1.99
21250--21340
31
3.0
31
96
3
168
42
17
6
32
1.75
22191--22232
18
2.3
18
87
4
57
59
0
0
40
0.97
25501--25549
22
2.2
23
88
3
73
55
2
10
32
1.45
26869--26935
31
2.2
31
83
5
82
31
8
11
47
1.71
27099--27160
27
2.4
27
84
10
78
59
0
3
37
1.13
37814--37958
64
2.3
63
84
7
177
31
21
17
29
1.96
38631--38693
29
2.1
30
85
2
83
19
19
26
34
1.95
41569--41659
41
2.2
40
83
9
105
41
0
2
56
1.12
41584--41661
40
1.9
41
87
7
115
41
0
1
57
1.07
41631--41675
21
2.1
21
84
12
56
53
2
0
44
1.13
44861--44904
15
2.9
15
82
0
52
45
13
36
4
1.64
47306--47332
14
1.9
14
100
0
54
29
3
7
59
1.42
50583--51020
83
5.3
82
77
8
415
30
17
16
35
1.92
50585--51020
165
2.6
165
83
5
533
30
17
16
35
1.92
51926--51998
18
3.9
18
82
7
101
27
30
21
20
1.98
51925--52018
38
2.5
38
85
3
127
25
28
21
24
1.99
51925--52021
18
5.1
20
75
15
89
25
27
21
24
1.99
60280--60361
2
41.0
2
92
0
137
46
2
1
50
1.22
60573--60622
22
2.3
22
78
0
55
26
24
22
28
1.99
61063--61098
14
2.6
14
100
0
72
52
0
19
27
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61402--61426
7
3.6
7
100
0
50
56
0
16
28
1.41

Tables:   1

The End!