Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005088.1 Hibiscus syriacus cultivar Beakdansim tig00011434_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  201410

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187365--187638
40
6.8
40
83
6
293
18
18
25
37
1.94
187365--187638
121
2.3
121
83
3
338
18
18
25
37
1.94
187566--187638
20
3.7
20
92
3
112
15
19
21
43
1.87
187564--187699
42
3.3
42
76
8
122
21
19
21
37
1.94
187468--187701
20
11.5
20
73
12
106
20
19
23
36
1.95
188428--188541
35
3.2
34
88
6
165
42
22
0
34
1.54
189549--189660
35
3.2
34
89
2
161
34
0
22
41
1.60
191016--191100
37
2.2
38
89
4
136
20
20
18
41
1.91
199230--199293
22
3.0
22
88
6
87
29
14
14
42
1.84

Tables:   1   2

The End!