Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005150.1 Hibiscus syriacus cultivar Beakdansim tig00011605_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126880

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94607--94657
24
2.2
22
89
6
75
49
0
5
45
1.26
95092--95158
33
2.0
33
94
0
116
29
0
44
25
1.54
96911--96959
19
2.6
19
93
0
80
34
2
10
53
1.47
97408--98754
201
6.8
201
89
3
2029
36
13
15
34
1.87
98229--98754
195
2.7
195
90
2
788
37
12
15
34
1.86
102921--104300
198
7.0
198
87
2
1781
39
14
16
30
1.88
105873--105936
19
3.4
19
97
0
119
31
7
10
50
1.66
106946--106981
15
2.4
15
100
0
72
25
22
30
22
1.99
108686--109207
200
2.6
199
85
3
692
40
14
15
29
1.87
109202--109364
87
1.9
87
92
0
272
33
14
12
39
1.84
109286--109330
23
2.0
23
86
8
65
42
17
6
33
1.76
111544--111627
25
3.2
25
73
15
87
53
7
3
35
1.46
116129--116170
22
1.9
22
90
0
66
45
19
14
21
1.85
118504--118541
19
2.0
19
100
0
76
31
10
15
42
1.81
118594--118730
59
2.3
59
82
3
159
32
12
13
40
1.82
121623--121694
38
1.9
37
97
2
135
38
26
5
29
1.79
121632--121692
19
3.2
19
65
17
54
40
24
3
31
1.71

Tables:   1   2

The End!