Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005158.1 Hibiscus syriacus cultivar Beakdansim tig00011629_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51913

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
290--349
26
2.3
26
94
0
102
18
31
18
31
1.95
11341--11386
20
2.3
20
85
10
60
39
26
0
34
1.57
15828--15855
13
2.2
13
100
0
56
28
28
25
17
1.98
17403--17668
92
2.9
92
96
0
480
31
17
14
36
1.90
26643--26677
15
2.2
16
90
5
54
34
14
0
51
1.42
28624--28703
21
3.8
21
80
3
81
22
17
23
36
1.95
29109--29195
35
2.4
36
88
1
122
33
10
11
44
1.74
29277--29339
29
2.2
29
94
0
108
44
3
14
38
1.61
29939--30012
35
2.1
35
82
5
87
32
27
27
13
1.94
30090--30171
24
3.5
24
84
3
112
35
17
18
29
1.93
34075--34322
130
1.9
130
93
0
424
35
14
13
36
1.86
34089--34353
130
2.0
129
81
4
309
38
12
13
34
1.84
34647--34707
26
2.3
26
82
5
68
45
1
3
49
1.28
34785--34818
16
2.0
18
88
11
54
64
5
2
26
1.30
34933--35009
35
2.2
35
85
0
100
38
1
22
37
1.62
37732--38095
182
2.0
182
93
1
631
27
14
17
40
1.88
40924--40969
12
3.6
12
81
16
56
45
17
19
17
1.85
40930--40970
12
3.1
13
80
19
57
46
14
17
21
1.84
43268--43309
21
2.0
21
90
0
66
30
11
7
50
1.66
43920--43972
15
3.4
15
70
10
52
37
7
7
47
1.60
45939--46098
80
2.0
80
97
0
302
36
13
16
33
1.88
50951--51026
28
2.7
27
76
11
82
55
13
13
18
1.69

Tables:   1

The End!