Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005187.1 Hibiscus syriacus cultivar Beakdansim tig00011712_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78146

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9099--9138
15
2.6
16
88
8
64
62
0
0
37
0.95
12685--12826
43
3.4
43
73
8
123
48
7
14
29
1.70
19464--19535
30
2.4
30
83
4
92
52
12
6
27
1.64
19608--19693
33
2.6
34
78
7
90
56
8
8
26
1.56
20036--20072
19
1.9
19
88
0
56
29
0
5
64
1.15
20037--20084
19
2.6
19
83
3
53
35
0
4
60
1.16
23054--24388
106
12.8
106
91
4
2074
22
18
25
33
1.97
23564--24384
200
4.0
200
91
3
1354
23
18
24
33
1.96
23009--24388
412
3.3
412
93
2
2258
23
18
24
33
1.97
51983--52060
23
3.3
23
78
1
75
32
20
20
26
1.97
52067--52284
103
2.1
103
96
0
400
36
23
13
26
1.92
54761--55768
246
4.1
249
82
4
1098
30
15
21
32
1.94
55652--55840
102
1.9
101
79
4
218
35
19
17
27
1.94
56278--58276
244
8.3
243
75
10
1490
30
15
22
31
1.95
56278--58276
492
4.1
488
77
9
1737
30
15
22
31
1.95
57188--57645
230
2.0
231
83
6
579
31
14
22
31
1.94
56402--58276
722
2.6
720
76
9
1787
30
15
22
31
1.95
74008--74048
2
20.5
2
90
9
66
51
2
46
0
1.14

Tables:   1

The End!