Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005211.1 Hibiscus syriacus cultivar Beakdansim tig00011790_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87709

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8697--8724
14
2.0
14
100
0
56
42
0
0
57
0.99
8678--8743
22
3.1
22
76
23
63
40
0
0
59
0.98
8680--8731
22
2.2
23
83
13
70
40
0
0
59
0.97
12273--12367
50
1.9
50
100
0
190
40
2
6
51
1.39
19947--19976
14
2.1
14
100
0
60
0
20
0
80
0.72
24017--24286
105
2.6
105
92
0
450
25
20
16
37
1.94
25183--25248
8
7.8
8
79
15
71
4
10
0
84
0.75
25180--25258
21
3.5
21
72
24
72
6
10
0
83
0.80
25186--25274
26
3.3
26
76
17
83
7
12
0
79
0.92
25180--25257
37
2.2
33
86
8
102
6
8
0
84
0.77
25198--25257
19
3.2
19
81
11
79
8
8
0
83
0.82
25183--25278
9
11.2
9
75
19
66
8
12
0
79
0.94
28815--28848
7
5.0
7
89
3
52
61
0
23
14
1.33
28813--28841
14
2.1
14
100
0
58
62
0
20
17
1.33
36427--36485
26
2.3
26
90
0
91
32
25
6
35
1.82
37282--37353
3
24.0
3
85
0
99
40
0
0
59
0.97
37753--37804
24
2.1
24
86
10
70
67
7
25
0
1.17
39443--39510
28
2.4
28
80
5
73
32
5
0
61
1.20
49573--49636
7
9.4
7
76
10
62
82
0
17
0
0.66
49573--49635
9
7.0
9
80
12
76
84
0
15
0
0.63
49577--49635
17
3.4
17
84
13
75
84
0
15
0
0.62
49589--49635
17
2.7
18
93
6
87
85
0
14
0
0.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50789--51124
83
4.0
83
95
0
600
26
12
22
38
1.90
51907--52416
113
4.5
113
87
4
715
38
15
18
28
1.90
51933--52416
227
2.1
226
88
3
740
38
15
18
28
1.91
52324--52561
73
3.3
73
95
0
406
33
18
16
31
1.93
52948--53034
3
29.0
3
88
0
120
40
0
0
59
0.97
53434--53489
26
2.1
27
86
3
78
66
7
26
0
1.18
54465--54504
12
3.1
13
82
10
55
40
0
0
60
0.97
55983--56009
14
1.9
14
100
0
54
22
14
22
40
1.90
56664--56690
11
2.5
11
100
0
54
0
0
7
92
0.38
60229--60350
61
2.0
60
93
1
208
55
5
19
18
1.62
60229--60376
61
2.4
60
85
6
156
56
5
19
18
1.60
63187--63298
45
2.5
45
92
4
183
36
9
23
30
1.87
63227--63298
24
3.1
24
63
25
64
34
9
23
31
1.87
63187--63312
45
2.8
44
90
6
182
37
9
22
30
1.86
73361--73394
13
2.6
13
86
13
52
29
0
2
67
1.05
74048--74090
18
2.4
18
88
7
61
20
4
0
74
1.00
74167--74244
33
2.4
33
97
0
147
23
12
0
64
1.28
80472--80574
53
1.9
53
96
0
188
29
16
14
39
1.88
80811--80896
44
2.0
44
85
0
118
39
16
16
27
1.90
81557--81622
28
2.3
29
89
2
98
15
4
33
46
1.66
81684--81805
38
3.3
38
82
12
164
12
9
36
40
1.76
81685--81795
33
3.2
33
83
12
150
12
9
35
42
1.76

Tables:   1

The End!